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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0191610

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.3HG0191610
Locus
HORVU.MOREX.r2.3HG0191610.1
URL
Gene Ontology GO:0005783
[ Show all 12 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 14 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: GTPase Der
GO:0005783; cellular_component; endoplasmic reticulum
GO:0005789; cellular_component; endoplasmic reticulum membrane
GO:0006629; biological_process; lipid metabolic process
GO:0006631; biological_process; fatty acid metabolic process
GO:0006633; biological_process; fatty acid biosynthetic process
GO:0016020; cellular_component; membrane
GO:0016021; cellular_component; integral component of membrane
GO:0016829; molecular_function; lyase activity
GO:0102158; molecular_function; very-long-chain 3-hydroxyacyl-CoA dehydratase activity
GO:0102343; molecular_function; 3-hydroxy-arachidoyl-CoA dehydratase activity
GO:0102344; molecular_function; 3-hydroxy-behenoyl-CoA dehydratase activity
GO:0102345; molecular_function; 3-hydroxy-lignoceroyl-CoA dehydratase activity
Type
Genomic
Sequence
HORVU.MOREX.r2.3HG0191610.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)