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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0184510

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0184510
Locus	HORVU.MOREX.r2.3HG0184510.1
URL	Gene Ontology GO:0003713 [ Show all 19 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 21 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: F-box family protein GO:0003713; molecular_function; transcription coactivator activity GO:0003779; molecular_function; actin binding GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005856; cellular_component; cytoskeleton GO:0006281; biological_process; DNA repair GO:0006357; biological_process; regulation of transcription by RNA polymerase II GO:0006974; biological_process; cellular response to DNA damage stimulus GO:0007050; biological_process; cell cycle arrest GO:0031252; cellular_component; cell leading edge GO:0034314; biological_process; Arp2/3 complex-mediated actin nucleation GO:0043065; biological_process; positive regulation of apoptotic process GO:0043620; biological_process; regulation of DNA-templated transcription in response to stress GO:0051091; biological_process; positive regulation of DNA-binding transcription factor activity GO:0070060; biological_process; de novo' actin filament nucleation GO:0070358; biological_process; actin polymerization-dependent cell motility GO:0071933; molecular_function; Arp2/3 complex binding GO:0072332; biological_process; intrinsic apoptotic signaling pathway by p53 class mediator
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0184510.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)