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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0184260

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0184260
Locus	HORVU.MOREX.r2.3HG0184260.1
URL	Gene Ontology GO:0002026 [ Show all 67 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 69 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Myb/SANT-like DNA-binding domain protein GO:0002026; biological_process; regulation of the force of heart contraction GO:0005516; molecular_function; calmodulin binding GO:0005654; cellular_component; nucleoplasm GO:0005737; cellular_component; cytoplasm GO:0005739; cellular_component; mitochondrion GO:0005783; cellular_component; endoplasmic reticulum GO:0005789; cellular_component; endoplasmic reticulum membrane GO:0005886; cellular_component; plasma membrane GO:0005887; cellular_component; integral component of plasma membrane GO:0006811; biological_process; ion transport GO:0006812; biological_process; cation transport GO:0006814; biological_process; sodium ion transport GO:0006883; biological_process; cellular sodium ion homeostasis GO:0006885; biological_process; regulation of pH GO:0009986; cellular_component; cell surface GO:0010447; biological_process; response to acidic pH GO:0010613; biological_process; positive regulation of cardiac muscle hypertrophy GO:0010882; biological_process; regulation of cardiac muscle contraction by calcium ion signaling GO:0014070; biological_process; response to organic cyclic compound GO:0014704; cellular_component; intercalated disc GO:0015297; molecular_function; antiporter activity GO:0015299; molecular_function; solute:proton antiporter activity GO:0015385; molecular_function; sodium:proton antiporter activity GO:0015386; molecular_function; potassium:proton antiporter activity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016323; cellular_component; basolateral plasma membrane GO:0016324; cellular_component; apical plasma membrane GO:0030154; biological_process; cell differentiation GO:0030307; biological_process; positive regulation of cell growth GO:0030315; cellular_component; T-tubule GO:0030346; molecular_function; protein phosphatase 2B binding GO:0032869; biological_process; cellular response to insulin stimulus GO:0035794; biological_process; positive regulation of mitochondrial membrane permeability GO:0035994; biological_process; response to muscle stretch GO:0036376; biological_process; sodium ion export across plasma membrane GO:0042383; cellular_component; sarcolemma GO:0043065; biological_process; positive regulation of apoptotic process GO:0043066; biological_process; negative regulation of apoptotic process GO:0045121; cellular_component; membrane raft GO:0045760; biological_process; positive regulation of action potential GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II GO:0048306; molecular_function; calcium-dependent protein binding GO:0048471; cellular_component; perinuclear region of cytoplasm GO:0051259; biological_process; protein complex oligomerization GO:0051453; biological_process; regulation of intracellular pH GO:0051930; biological_process; regulation of sensory perception of pain GO:0055007; biological_process; cardiac muscle cell differentiation GO:0055085; biological_process; transmembrane transport GO:0070417; biological_process; cellular response to cold GO:0070886; biological_process; positive regulation of calcineurin-NFAT signaling cascade GO:0070997; biological_process; neuron death GO:0071236; biological_process; cellular response to antibiotic GO:0071257; biological_process; cellular response to electrical stimulus GO:0071407; biological_process; cellular response to organic cyclic compound GO:0071456; biological_process; cellular response to hypoxia GO:0071468; biological_process; cellular response to acidic pH GO:0071805; biological_process; potassium ion transmembrane transport GO:0071872; biological_process; cellular response to epinephrine stimulus GO:0086003; biological_process; cardiac muscle cell contraction GO:0086092; biological_process; regulation of the force of heart contraction by cardiac conduction GO:0090533; cellular_component; cation-transporting ATPase complex GO:0098719; biological_process; sodium ion import across plasma membrane GO:0098735; biological_process; positive regulation of the force of heart contraction GO:1902533; biological_process; positive regulation of intracellular signal transduction GO:1902600; biological_process; proton transmembrane transport GO:1903281; biological_process; positive regulation of calcium:sodium antiporter activity
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0184260.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)