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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0184120

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0184120
Locus	HORVU.MOREX.r2.3HG0184120.1
URL	Gene Ontology GO:0000904 [ Show all 48 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 50 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Glycosyltransferase GO:0000904; biological_process; cell morphogenesis involved in differentiation GO:0001736; biological_process; establishment of planar polarity GO:0001737; biological_process; establishment of imaginal disc-derived wing hair orientation GO:0005509; molecular_function; calcium ion binding GO:0005515; molecular_function; protein binding GO:0005739; cellular_component; mitochondrion GO:0005886; cellular_component; plasma membrane GO:0005887; cellular_component; integral component of plasma membrane GO:0007155; biological_process; cell adhesion GO:0007156; biological_process; homophilic cell adhesion via plasma membrane adhesion molecules GO:0007157; biological_process; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules GO:0007164; biological_process; establishment of tissue polarity GO:0007446; biological_process; imaginal disc growth GO:0007447; biological_process; imaginal disc pattern formation GO:0007476; biological_process; imaginal disc-derived wing morphogenesis GO:0008283; biological_process; cell population proliferation GO:0008285; biological_process; negative regulation of cell population proliferation GO:0009888; biological_process; tissue development GO:0010629; biological_process; negative regulation of gene expression GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016318; biological_process; ommatidial rotation GO:0016324; cellular_component; apical plasma membrane GO:0016327; cellular_component; apicolateral plasma membrane GO:0016336; biological_process; establishment or maintenance of polarity of larval imaginal disc epithelium GO:0016339; biological_process; calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules GO:0018149; biological_process; peptide cross-linking GO:0032880; biological_process; regulation of protein localization GO:0035159; biological_process; regulation of tube length, open tracheal system GO:0035209; biological_process; pupal development GO:0035220; biological_process; wing disc development GO:0035329; biological_process; hippo signaling GO:0035331; biological_process; negative regulation of hippo signaling GO:0040008; biological_process; regulation of growth GO:0042067; biological_process; establishment of ommatidial planar polarity GO:0044331; biological_process; cell-cell adhesion mediated by cadherin GO:0045198; biological_process; establishment of epithelial cell apical/basal polarity GO:0045296; molecular_function; cadherin binding GO:0045317; biological_process; equator specification GO:0045570; biological_process; regulation of imaginal disc growth GO:0045571; biological_process; negative regulation of imaginal disc growth GO:0045926; biological_process; negative regulation of growth GO:0046620; biological_process; regulation of organ growth GO:0048105; biological_process; establishment of body hair planar orientation GO:0060071; biological_process; Wnt signaling pathway, planar cell polarity pathway GO:0090176; biological_process; microtubule cytoskeleton organization involved in establishment of planar polarity GO:0090251; biological_process; protein localization involved in establishment of planar polarity GO:0098609; biological_process; cell-cell adhesion
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0184120.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)