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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0183110

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.3HG0183110
Locus
HORVU.MOREX.r2.3HG0183110.1
URL
Gene Ontology GO:0000122
[ Show all 36 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 38 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta).
Functional annotation published with the genome: Disease resistance protein (NBS-LRR class) family
GO:0000122; biological_process; negative regulation of transcription by RNA polymerase II
GO:0000902; biological_process; cell morphogenesis
GO:0005102; molecular_function; signaling receptor binding
GO:0005509; molecular_function; calcium ion binding
GO:0005634; cellular_component; nucleus
GO:0005783; cellular_component; endoplasmic reticulum
GO:0005794; cellular_component; Golgi apparatus
GO:0005886; cellular_component; plasma membrane
GO:0005887; cellular_component; integral component of plasma membrane
GO:0005911; cellular_component; cell-cell junction
GO:0006351; biological_process; transcription, DNA-templated
GO:0006355; biological_process; regulation of transcription, DNA-templated
GO:0007155; biological_process; cell adhesion
GO:0007157; biological_process; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007165; biological_process; signal transduction
GO:0007411; biological_process; axon guidance
GO:0016020; cellular_component; membrane
GO:0016021; cellular_component; integral component of membrane
GO:0016605; cellular_component; PML body
GO:0030054; cellular_component; cell junction
GO:0030175; cellular_component; filopodium
GO:0030425; cellular_component; dendrite
GO:0030426; cellular_component; growth cone
GO:0035584; biological_process; calcium-mediated signaling using intracellular calcium source
GO:0042803; molecular_function; protein homodimerization activity
GO:0042995; cellular_component; cell projection
GO:0043005; cellular_component; neuron projection
GO:0043197; cellular_component; dendritic spine
GO:0045202; cellular_component; synapse
GO:0045211; cellular_component; postsynaptic membrane
GO:0046982; molecular_function; protein heterodimerization activity
GO:0048666; biological_process; neuron development
GO:0050839; molecular_function; cell adhesion molecule binding
GO:0051491; biological_process; positive regulation of filopodium assembly
GO:0097264; biological_process; self proteolysis
GO:0098609; biological_process; cell-cell adhesion
Type
Genomic
Sequence
HORVU.MOREX.r2.3HG0183110.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)