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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0178410

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0178410
Locus	HORVU.MOREX.r2.2HG0178410.1
URL	Gene Ontology GO:0005313 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: WD40 repeat-like protein GO:0005313; molecular_function; L-glutamate transmembrane transporter activity GO:0005509; molecular_function; calcium ion binding GO:0005739; cellular_component; mitochondrion GO:0005743; cellular_component; mitochondrial inner membrane GO:0006754; biological_process; ATP biosynthetic process GO:0015183; molecular_function; L-aspartate transmembrane transporter activity GO:0015810; biological_process; aspartate transmembrane transport GO:0015813; biological_process; L-glutamate transmembrane transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0043490; biological_process; malate-aspartate shuttle GO:0045333; biological_process; cellular respiration GO:0046872; molecular_function; metal ion binding GO:0051592; biological_process; response to calcium ion GO:0055085; biological_process; transmembrane transport GO:0070778; biological_process; L-aspartate transmembrane transport
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0178410.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)