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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0175150

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0175150
Locus	HORVU.MOREX.r2.2HG0175150.1
URL	Gene Ontology GO:0000166 [ Show all 12 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Ulp1 protease family protein GO:0000166; molecular_function; nucleotide binding GO:0003677; molecular_function; DNA binding GO:0003910; molecular_function; DNA ligase (ATP) activity GO:0004518; molecular_function; nuclease activity GO:0004519; molecular_function; endonuclease activity GO:0005524; molecular_function; ATP binding GO:0006260; biological_process; DNA replication GO:0006266; biological_process; DNA ligation GO:0016787; molecular_function; hydrolase activity GO:0016874; molecular_function; ligase activity GO:0039684; biological_process; rolling circle single-stranded viral DNA replication GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0175150.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)