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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0173600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0173600
Locus	HORVU.MOREX.r2.2HG0173600.1
URL	Gene Ontology GO:0001581 [ Show all 19 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 21 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: F-box family protein GO:0001581; biological_process; detection of chemical stimulus involved in sensory perception of sour taste GO:0005262; molecular_function; calcium channel activity GO:0005509; molecular_function; calcium ion binding GO:0005515; molecular_function; protein binding GO:0005886; cellular_component; plasma membrane GO:0006811; biological_process; ion transport GO:0006812; biological_process; cation transport GO:0006816; biological_process; calcium ion transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0030246; molecular_function; carbohydrate binding GO:0034220; biological_process; ion transmembrane transport GO:0034703; cellular_component; cation channel complex GO:0043235; cellular_component; receptor complex GO:0050915; biological_process; sensory perception of sour taste GO:0050982; biological_process; detection of mechanical stimulus GO:0070588; biological_process; calcium ion transmembrane transport GO:0071468; biological_process; cellular response to acidic pH GO:0098655; biological_process; cation transmembrane transport
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0173600.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)