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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0169940

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0169940
Locus	HORVU.MOREX.r2.2HG0169940.1
URL	Gene Ontology GO:0004721 [ Show all 31 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 33 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Glycosyltransferases GO:0004721; molecular_function; phosphoprotein phosphatase activity GO:0004725; molecular_function; protein tyrosine phosphatase activity GO:0005886; cellular_component; plasma membrane GO:0006470; biological_process; protein dephosphorylation GO:0007155; biological_process; cell adhesion GO:0008201; molecular_function; heparin binding GO:0010977; biological_process; negative regulation of neuron projection development GO:0014069; cellular_component; postsynaptic density GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016311; biological_process; dephosphorylation GO:0016787; molecular_function; hydrolase activity GO:0016791; molecular_function; phosphatase activity GO:0030054; cellular_component; cell junction GO:0030285; cellular_component; integral component of synaptic vesicle membrane GO:0030424; cellular_component; axon GO:0030517; biological_process; negative regulation of axon extension GO:0030672; cellular_component; synaptic vesicle membrane GO:0031410; cellular_component; cytoplasmic vesicle GO:0035335; biological_process; peptidyl-tyrosine dephosphorylation GO:0035374; molecular_function; chondroitin sulfate binding GO:0042995; cellular_component; cell projection GO:0043005; cellular_component; neuron projection GO:0043204; cellular_component; perikaryon GO:0043395; molecular_function; heparan sulfate proteoglycan binding GO:0045202; cellular_component; synapse GO:0045211; cellular_component; postsynaptic membrane GO:0048671; biological_process; negative regulation of collateral sprouting GO:0048681; biological_process; negative regulation of axon regeneration GO:0061000; biological_process; negative regulation of dendritic spine development GO:0099061; cellular_component; integral component of postsynaptic density membrane
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0169940.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)