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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0169080

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0169080
Locus	HORVU.MOREX.r2.2HG0169080.1
URL	Gene Ontology GO:0000166 [ Show all 43 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 45 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Zinc transporter GO:0000166; molecular_function; nucleotide binding GO:0002376; biological_process; immune system process GO:0003674; molecular_function; molecular_function GO:0004672; molecular_function; protein kinase activity GO:0004713; molecular_function; protein tyrosine kinase activity GO:0004714; molecular_function; transmembrane receptor protein tyrosine kinase activity GO:0005011; molecular_function; macrophage colony-stimulating factor receptor activity GO:0005524; molecular_function; ATP binding GO:0005575; cellular_component; cellular_component GO:0005622; cellular_component; intracellular GO:0005886; cellular_component; plasma membrane GO:0006468; biological_process; protein phosphorylation GO:0006954; biological_process; inflammatory response GO:0007169; biological_process; transmembrane receptor protein tyrosine kinase signaling pathway GO:0007519; biological_process; skeletal muscle tissue development GO:0008283; biological_process; cell population proliferation GO:0008284; biological_process; positive regulation of cell population proliferation GO:0008360; biological_process; regulation of cell shape GO:0009986; cellular_component; cell surface GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0018108; biological_process; peptidyl-tyrosine phosphorylation GO:0019221; biological_process; cytokine-mediated signaling pathway GO:0019955; molecular_function; cytokine binding GO:0030316; biological_process; osteoclast differentiation GO:0030335; biological_process; positive regulation of cell migration GO:0031529; biological_process; ruffle organization GO:0036006; biological_process; cellular response to macrophage colony-stimulating factor stimulus GO:0038145; biological_process; macrophage colony-stimulating factor signaling pathway GO:0042531; biological_process; positive regulation of tyrosine phosphorylation of STAT protein GO:0045087; biological_process; innate immune response GO:0045124; biological_process; regulation of bone resorption GO:0045672; biological_process; positive regulation of osteoclast differentiation GO:0046488; biological_process; phosphatidylinositol metabolic process GO:0046777; biological_process; protein autophosphorylation GO:0048015; biological_process; phosphatidylinositol-mediated signaling GO:0070374; biological_process; positive regulation of ERK1 and ERK2 cascade GO:0071345; biological_process; cellular response to cytokine stimulus GO:0071902; biological_process; positive regulation of protein serine/threonine kinase activity GO:2000249; biological_process; regulation of actin cytoskeleton reorganization
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0169080.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)