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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0168470

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0168470
Locus	HORVU.MOREX.r2.2HG0168470.1
URL	Gene Ontology GO:0004004 [ Show all 22 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 25 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Universal stress family protein GO:0003724; molecular_function; RNA helicase activity The GO term GO:0004004 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0003724 GO:0000166; molecular_function; nucleotide binding GO:0003674; molecular_function; molecular_function GO:0003676; molecular_function; nucleic acid binding GO:0003723; molecular_function; RNA binding GO:0004386; molecular_function; helicase activity GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005643; cellular_component; nuclear pore GO:0005730; cellular_component; nucleolus GO:0005737; cellular_component; cytoplasm GO:0008150; biological_process; biological_process GO:0008380; biological_process; RNA splicing GO:0010468; biological_process; regulation of gene expression GO:0010501; biological_process; RNA secondary structure unwinding GO:0015031; biological_process; protein transport GO:0016020; cellular_component; membrane GO:0016787; molecular_function; hydrolase activity GO:0031965; cellular_component; nuclear membrane GO:0051028; biological_process; mRNA transport GO:0071013; cellular_component; catalytic step 2 spliceosome
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0168470.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)