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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0167180

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0167180
Locus	HORVU.MOREX.r2.2HG0167180.1
URL	Gene Ontology GO:0004003 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 19 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Endoribonuclease YbeY GO:0003678; molecular_function; DNA helicase activity The GO term GO:0004003 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0003678 GO:0000166; molecular_function; nucleotide binding GO:0000724; biological_process; double-strand break repair via homologous recombination GO:0003677; molecular_function; DNA binding GO:0004518; molecular_function; nuclease activity GO:0004527; molecular_function; exonuclease activity GO:0005524; molecular_function; ATP binding GO:0006281; biological_process; DNA repair GO:0006974; biological_process; cellular response to DNA damage stimulus GO:0016787; molecular_function; hydrolase activity GO:0016788; molecular_function; hydrolase activity, acting on ester bonds GO:0032508; biological_process; DNA duplex unwinding GO:0046872; molecular_function; metal ion binding GO:0051536; molecular_function; iron-sulfur cluster binding GO:0051539; molecular_function; 4 iron, 4 sulfur cluster binding GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0167180.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)