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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0166580

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0166580
Locus	HORVU.MOREX.r2.2HG0166580.1
URL	Gene Ontology GO:0015688 [ Show all 8 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 11 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Transposon protein, putative, CACTA, En/Spm sub-class, expressed GO:0033214; biological_process; siderophore-dependent iron import into cell The GO term GO:0015688 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0033214 GO:0005886; cellular_component; plasma membrane GO:0010039; biological_process; response to iron ion GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0048316; biological_process; seed development GO:0051980; molecular_function; iron-nicotianamine transmembrane transporter activity GO:0055085; biological_process; transmembrane transport
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0166580.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)