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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0159050
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe
HORVU.MOREX.r2.2HG0159050

Locus
HORVU.MOREX.r2.2HG0159050.1

URL
Gene Ontology GO:0000303

[ Show all 12 ]

Reference

Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.

General Remarks
[ Hide all but 1 of 14 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: Protein strawberry notch-like protein 1
GO:0000303; biological_process; response to superoxide
GO:0001666; biological_process; response to hypoxia
GO:0002240; biological_process; response to molecule of oomycetes origin
GO:0003700; molecular_function; DNA-binding transcription factor activity
GO:0006355; biological_process; regulation of transcription, DNA-templated
GO:0008219; biological_process; cell death
GO:0009626; biological_process; plant-type hypersensitive response
GO:0009862; biological_process; systemic acquired resistance, salicylic acid mediated signaling pathway
GO:0010104; biological_process; regulation of ethylene-activated signaling pathway
GO:0010310; biological_process; regulation of hydrogen peroxide metabolic process
GO:0010602; biological_process; regulation of 1-aminocyclopropane-1-carboxylate metabolic process
GO:0010618; biological_process; aerenchyma formation

Type
Genomic

Sequence
HORVU.MOREX.r2.2HG0159050.1

Source Species
Hordeum vulgare

Source Germplasm
Morex (barley)