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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0157810

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0157810
Locus	HORVU.MOREX.r2.2HG0157810.1
URL	Gene Ontology GO:0000166 [ Show all 9 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 11 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Calcium-binding EF-hand family protein GO:0000166; molecular_function; nucleotide binding GO:0003856; molecular_function; 3-dehydroquinate synthase activity GO:0005737; cellular_component; cytoplasm GO:0008652; biological_process; cellular amino acid biosynthetic process GO:0009073; biological_process; aromatic amino acid family biosynthetic process GO:0009423; biological_process; chorismate biosynthetic process GO:0016829; molecular_function; lyase activity GO:0016838; molecular_function; carbon-oxygen lyase activity, acting on phosphates GO:0046872; molecular_function; metal ion binding
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0157810.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)