Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.2HG0150160

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0150160
Locus	HORVU.MOREX.r2.2HG0150160.1
URL	Gene Ontology GO:0050880 [ Show all 11 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Imidazole glycerol phosphate synthase subunit HisF GO:0097746; biological_process; regulation of blood vessel diameter The GO term GO:0050880 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0097746 GO:0004857; molecular_function; enzyme inhibitor activity GO:0005576; cellular_component; extracellular region GO:0008191; molecular_function; metalloendopeptidase inhibitor activity GO:0008217; biological_process; regulation of blood pressure GO:0009405; biological_process; pathogenesis GO:0010466; biological_process; negative regulation of peptidase activity GO:0010951; biological_process; negative regulation of endopeptidase activity GO:0030414; molecular_function; peptidase inhibitor activity GO:0042311; biological_process; vasodilation GO:0090729; molecular_function; toxin activity
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0150160.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)