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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0147260

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.2HG0147260
Locus
HORVU.MOREX.r2.2HG0147260.1
URL
Gene Ontology GO:0004568
Gene Ontology GO:0005975
Gene Ontology GO:0006032
Gene Ontology GO:0008061
Gene Ontology GO:0016998
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 7 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: COX assembly mitochondrial protein 2-like protein
GO:0004568; molecular_function; chitinase activity
GO:0005975; biological_process; carbohydrate metabolic process
GO:0006032; biological_process; chitin catabolic process
GO:0008061; molecular_function; chitin binding
GO:0016998; biological_process; cell wall macromolecule catabolic process
Type
Genomic
Sequence
HORVU.MOREX.r2.2HG0147260.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)