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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0130900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0130900
Locus	HORVU.MOREX.r2.2HG0130900.1
URL	Gene Ontology GO:0001788 [ Show all 29 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 31 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Protein CLEC16A-like protein GO:0001788; biological_process; antibody-dependent cellular cytotoxicity GO:0001798; biological_process; positive regulation of type IIa hypersensitivity GO:0001812; biological_process; positive regulation of type I hypersensitivity GO:0002455; biological_process; humoral immune response mediated by circulating immunoglobulin GO:0003823; molecular_function; antigen binding GO:0005771; cellular_component; multivesicular body GO:0005829; cellular_component; cytosol GO:0005886; cellular_component; plasma membrane GO:0006910; biological_process; phagocytosis, recognition GO:0006911; biological_process; phagocytosis, engulfment GO:0006958; biological_process; complement activation, classical pathway GO:0008333; biological_process; endosome to lysosome transport GO:0009897; cellular_component; external side of plasma membrane GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016064; biological_process; immunoglobulin mediated immune response GO:0019882; biological_process; antigen processing and presentation GO:0030162; biological_process; regulation of proteolysis GO:0034987; molecular_function; immunoglobulin receptor binding GO:0042571; cellular_component; immunoglobulin complex, circulating GO:0042742; biological_process; defense response to bacterium GO:0045022; biological_process; early endosome to late endosome transport GO:0045087; biological_process; innate immune response GO:0045807; biological_process; positive regulation of endocytosis GO:0050766; biological_process; positive regulation of phagocytosis GO:0050778; biological_process; positive regulation of immune response GO:0050853; biological_process; B cell receptor signaling pathway GO:0050871; biological_process; positive regulation of B cell activation GO:0072562; cellular_component; blood microparticle
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0130900.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)