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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0127470

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0127470
Locus	HORVU.MOREX.r2.2HG0127470.1
URL	Gene Ontology GO:0001104 [ Show all 19 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 22 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: cysteine-rich RLK (RECEPTOR-like protein kinase) 11 GO:0003712; molecular_function; transcription coregulator activity The GO term GO:0001104 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0003712 GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0006357; biological_process; regulation of transcription by RNA polymerase II GO:0006367; biological_process; transcription initiation from RNA polymerase II promoter GO:0007275; biological_process; multicellular organism development GO:0007526; biological_process; larval somatic muscle development GO:0016592; cellular_component; mediator complex GO:0022416; biological_process; chaeta development GO:0036011; biological_process; imaginal disc-derived leg segmentation GO:0045165; biological_process; cell fate commitment GO:0045498; biological_process; sex comb development GO:0048190; biological_process; wing disc dorsal/ventral pattern formation GO:0048749; biological_process; compound eye development GO:0070847; cellular_component; core mediator complex GO:0090263; biological_process; positive regulation of canonical Wnt signaling pathway
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0127470.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)