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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0120070

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0120070
Locus	HORVU.MOREX.r2.2HG0120070.1
URL	Gene Ontology GO:0000166 [ Show all 23 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 25 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: DIS3-like exonuclease 2 GO:0000166; molecular_function; nucleotide binding GO:0003924; molecular_function; GTPase activity GO:0005096; molecular_function; GTPase activator activity GO:0005515; molecular_function; protein binding GO:0005525; molecular_function; GTP binding GO:0005634; cellular_component; nucleus GO:0005730; cellular_component; nucleolus GO:0005737; cellular_component; cytoplasm GO:0005739; cellular_component; mitochondrion GO:0005829; cellular_component; cytosol GO:0014068; biological_process; positive regulation of phosphatidylinositol 3-kinase signaling GO:0019901; molecular_function; protein kinase binding GO:0030295; molecular_function; protein kinase activator activity GO:0032147; biological_process; activation of protein kinase activity GO:0033601; biological_process; positive regulation of mammary gland epithelial cell proliferation GO:0043066; biological_process; negative regulation of apoptotic process GO:0043524; biological_process; negative regulation of neuron apoptotic process GO:0043547; biological_process; positive regulation of GTPase activity GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II GO:0046427; biological_process; positive regulation of receptor signaling pathway via JAK-STAT GO:0046872; molecular_function; metal ion binding GO:0060749; biological_process; mammary gland alveolus development GO:2001240; biological_process; negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0120070.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)