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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0118970

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0118970
Locus	HORVU.MOREX.r2.2HG0118970.1
URL	Gene Ontology GO:0000166 [ Show all 22 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 24 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: COP9 signalosome complex subunit-like protein GO:0000166; molecular_function; nucleotide binding GO:0002250; biological_process; adaptive immune response GO:0002376; biological_process; immune system process GO:0002827; biological_process; positive regulation of T-helper 1 type immune response GO:0003924; molecular_function; GTPase activity GO:0005524; molecular_function; ATP binding GO:0005737; cellular_component; cytoplasm GO:0005886; cellular_component; plasma membrane GO:0006952; biological_process; defense response GO:0006954; biological_process; inflammatory response GO:0016020; cellular_component; membrane GO:0016887; molecular_function; ATPase activity GO:0019897; cellular_component; extrinsic component of plasma membrane GO:0045087; biological_process; innate immune response GO:0050717; biological_process; positive regulation of interleukin-1 alpha secretion GO:0050729; biological_process; positive regulation of inflammatory response GO:0050829; biological_process; defense response to Gram-negative bacterium GO:0050832; biological_process; defense response to fungus GO:1900426; biological_process; positive regulation of defense response to bacterium GO:2000318; biological_process; positive regulation of T-helper 17 type immune response GO:2000484; biological_process; positive regulation of interleukin-8 secretion GO:2000778; biological_process; positive regulation of interleukin-6 secretion
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0118970.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)