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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0115230

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0115230
Locus	HORVU.MOREX.r2.2HG0115230.1
URL	Gene Ontology GO:0009496 [ Show all 14 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 16 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: F-box protein family-like GO:0009496; molecular_function; plastoquinol--plastocyanin reductase activity GO:0009579; cellular_component; thylakoid GO:0015979; biological_process; photosynthesis GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016491; molecular_function; oxidoreductase activity GO:0016679; molecular_function; oxidoreductase activity, acting on diphenols and related substances as donors GO:0022900; biological_process; electron transport chain GO:0042651; cellular_component; thylakoid membrane GO:0045158; molecular_function; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity GO:0046872; molecular_function; metal ion binding GO:0051536; molecular_function; iron-sulfur cluster binding GO:0051537; molecular_function; 2 iron, 2 sulfur cluster binding GO:0055114; biological_process; oxidation-reduction process
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0115230.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)