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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0094550

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0094550
Locus	HORVU.MOREX.r2.2HG0094550.1
URL	Gene Ontology GO:0000775 [ Show all 26 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 28 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: E3 ubiquitin-protein ligase RNF130 GO:0000775; cellular_component; chromosome, centromeric region GO:0000776; cellular_component; kinetochore GO:0000777; cellular_component; condensed chromosome kinetochore GO:0000922; cellular_component; spindle pole GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005635; cellular_component; nuclear envelope GO:0005694; cellular_component; chromosome GO:0005737; cellular_component; cytoplasm GO:0005813; cellular_component; centrosome GO:0005815; cellular_component; microtubule organizing center GO:0005819; cellular_component; spindle GO:0005829; cellular_component; cytosol GO:0005856; cellular_component; cytoskeleton GO:0007049; biological_process; cell cycle GO:0007093; biological_process; mitotic cell cycle checkpoint GO:0007094; biological_process; mitotic spindle assembly checkpoint GO:0042130; biological_process; negative regulation of T cell proliferation GO:0042802; molecular_function; identical protein binding GO:0043515; molecular_function; kinetochore binding GO:0048538; biological_process; thymus development GO:0051301; biological_process; cell division GO:0051315; biological_process; attachment of mitotic spindle microtubules to kinetochore GO:0072686; cellular_component; mitotic spindle GO:0090235; biological_process; regulation of metaphase plate congression GO:1901990; biological_process; regulation of mitotic cell cycle phase transition
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0094550.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)