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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0057040

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0057040
Locus	HORVU.MOREX.r2.1HG0057040.1
URL	Gene Ontology GO:0015991 Gene Ontology GO:0005773 Gene Ontology GO:0033178 Gene Ontology GO:0046961
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 7 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Transposon protein CACTA, En/Spm sub-class GO:1902600; biological_process; proton transmembrane transport The GO term GO:0015991 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:1902600 GO:0005773; cellular_component; vacuole GO:0033178; cellular_component; proton-transporting two-sector ATPase complex, catalytic domain GO:0046961; molecular_function; proton-transporting ATPase activity, rotational mechanism
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0057040.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)