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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0054570

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0054570
Locus	HORVU.MOREX.r2.1HG0054570.1
URL	Gene Ontology GO:0004860 [ Show all 11 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 13 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Serine/threonine-protein phosphatase 7 long form-like protein GO:0004860; molecular_function; protein kinase inhibitor activity GO:0005737; cellular_component; cytoplasm GO:0005856; cellular_component; cytoskeleton GO:0006469; biological_process; negative regulation of protein kinase activity GO:0008134; molecular_function; transcription factor binding GO:0031625; molecular_function; ubiquitin protein ligase binding GO:0032436; biological_process; positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0043405; biological_process; regulation of MAP kinase activity GO:0045081; biological_process; negative regulation of interleukin-10 biosynthetic process GO:0045599; biological_process; negative regulation of fat cell differentiation GO:0055106; molecular_function; ubiquitin-protein transferase regulator activity
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0054570.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)