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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0047580

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0047580
Locus	HORVU.MOREX.r2.1HG0047580.1
URL	Gene Ontology GO:0000166 [ Show all 35 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 37 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Receptor-like kinase GO:0000166; molecular_function; nucleotide binding GO:0004672; molecular_function; protein kinase activity GO:0004713; molecular_function; protein tyrosine kinase activity GO:0004714; molecular_function; transmembrane receptor protein tyrosine kinase activity GO:0005003; molecular_function; ephrin receptor activity GO:0005004; molecular_function; GPI-linked ephrin receptor activity GO:0005524; molecular_function; ATP binding GO:0005768; cellular_component; endosome GO:0005886; cellular_component; plasma membrane GO:0005887; cellular_component; integral component of plasma membrane GO:0006468; biological_process; protein phosphorylation GO:0006929; biological_process; substrate-dependent cell migration GO:0007155; biological_process; cell adhesion GO:0007169; biological_process; transmembrane receptor protein tyrosine kinase signaling pathway GO:0007275; biological_process; multicellular organism development GO:0007399; biological_process; nervous system development GO:0007411; biological_process; axon guidance GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016322; biological_process; neuron remodeling GO:0016740; molecular_function; transferase activity GO:0018108; biological_process; peptidyl-tyrosine phosphorylation GO:0030155; biological_process; regulation of cell adhesion GO:0031175; biological_process; neuron projection development GO:0031901; cellular_component; early endosome membrane GO:0033628; biological_process; regulation of cell adhesion mediated by integrin GO:0042995; cellular_component; cell projection GO:0043005; cellular_component; neuron projection GO:0043410; biological_process; positive regulation of MAPK cascade GO:0043552; biological_process; positive regulation of phosphatidylinositol 3-kinase activity GO:0046777; biological_process; protein autophosphorylation GO:0048013; biological_process; ephrin receptor signaling pathway GO:0071372; biological_process; cellular response to follicle-stimulating hormone stimulus
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0047580.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)