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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0043910

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0043910
Locus	HORVU.MOREX.r2.1HG0043910.1
URL	Gene Ontology GO:0005737 Gene Ontology GO:0016441 Gene Ontology GO:0055087 Gene Ontology GO:0070478
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 6 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex GO:0005737; cellular_component; cytoplasm GO:0016441; biological_process; posttranscriptional gene silencing GO:0055087; cellular_component; Ski complex GO:0070478; biological_process; nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0043910.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)