Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.1HG0015650

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0015650
Locus	HORVU.MOREX.r2.1HG0015650.1
URL	Gene Ontology GO:0004003 [ Show all 13 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 16 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Dihydroflavonol 4-reductase/flavanone protein GO:0003678; molecular_function; DNA helicase activity The GO term GO:0004003 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0003678 GO:0004386; molecular_function; helicase activity The GO term GO:0008026 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0004386 GO:0000166; molecular_function; nucleotide binding GO:0003676; molecular_function; nucleic acid binding GO:0003677; molecular_function; DNA binding GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0006139; biological_process; nucleobase-containing compound metabolic process GO:0006289; biological_process; nucleotide-excision repair GO:0016787; molecular_function; hydrolase activity GO:0016818; molecular_function; hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides GO:0032508; biological_process; DNA duplex unwinding
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0015650.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)