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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0003310

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0003310
Locus	HORVU.MOREX.r2.1HG0003310.1
URL	Gene Ontology GO:0000139 [ Show all 43 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 45 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Leucine--tRNA ligase GO:0000139; cellular_component; Golgi membrane GO:0000166; molecular_function; nucleotide binding GO:0003924; molecular_function; GTPase activity GO:0004871; molecular_function; obsolete signal transducer activity GO:0005515; molecular_function; protein binding GO:0005525; molecular_function; GTP binding GO:0005634; cellular_component; nucleus GO:0005730; cellular_component; nucleolus GO:0005737; cellular_component; cytoplasm GO:0005789; cellular_component; endoplasmic reticulum membrane GO:0005794; cellular_component; Golgi apparatus GO:0005813; cellular_component; centrosome GO:0005815; cellular_component; microtubule organizing center GO:0005834; cellular_component; heterotrimeric G-protein complex GO:0005856; cellular_component; cytoskeleton GO:0005886; cellular_component; plasma membrane GO:0006906; biological_process; vesicle fusion GO:0007049; biological_process; cell cycle GO:0007165; biological_process; signal transduction GO:0007186; biological_process; G protein-coupled receptor signaling pathway GO:0007188; biological_process; adenylate cyclase-modulating G protein-coupled receptor signaling pathway GO:0007193; biological_process; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway GO:0007212; biological_process; dopamine receptor signaling pathway GO:0007420; biological_process; brain development GO:0016020; cellular_component; membrane GO:0016239; biological_process; positive regulation of macroautophagy GO:0019001; molecular_function; guanyl nucleotide binding GO:0019003; molecular_function; GDP binding GO:0019904; molecular_function; protein domain specific binding GO:0030496; cellular_component; midbody GO:0031683; molecular_function; G-protein beta/gamma-subunit complex binding GO:0031821; molecular_function; G protein-coupled serotonin receptor binding GO:0032794; molecular_function; GTPase activating protein binding GO:0032930; biological_process; positive regulation of superoxide anion generation GO:0033864; biological_process; positive regulation of NAD(P)H oxidase activity GO:0042588; cellular_component; zymogen granule GO:0045121; cellular_component; membrane raft GO:0046039; biological_process; GTP metabolic process GO:0046872; molecular_function; metal ion binding GO:0051048; biological_process; negative regulation of secretion GO:0051301; biological_process; cell division GO:1904707; biological_process; positive regulation of vascular smooth muscle cell proliferation GO:2001234; biological_process; negative regulation of apoptotic signaling pathway
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0003310.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)