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GrainGenes Marker Report: scssr14079

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Locus	scssr14079
Type	Microsatellite SNP
Synonym	Other name Ctig8511 Synonym ABC14079_L01R01
Chromosome	4H
Map	[ Hide all but 1 of 9 ] Barley-ConsensusFHB-4H 88.96 Hordeum-Consensus2005-SNP-4H 81.161 Hordeum-Consensus2007-SSR-4H 78.92 Hordeum-OWB-2005-4H 79.6 Hordeum-OWB-OPA2008-4H 80.974 Hordeum-OWB-SNP-4H 84.82 Hordeum-QTLConsensus-Abiotic-4H 81.16 Hordeum-QTLConsensus-Agronomic-4H 81.16 Hv-Integrated2009-4H 88.3
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Map Data	Barley, Abiotic QTL Consensus [ Show all 9 ]
Species	Hordeum vulgare
Probe	ABC14079_L01R01 scssr14079
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Ramsay L et al. (2004) Variation shown by molecular markers in barley: genomic and genetic contraints Aspects of Applied Biology 72:146-154.
Data Source	Russell, Joanne
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' [ Show all 6 ]
Probe for Locus	ABC14079_L01R01
Locus	scssr14079
Data at Germinate	ABC14079
General Remarks	Estimated product size = 102 BarleySNP type = Contig Indel Technology platform used = Radioisotope Labelled PCR Separation Affymetrix contig name = abc14079
PCR primers	5' AAAATAAGGTTTCTTGTTCTTGG 5' GAAACCCTGTTGAAGTACGG
Source Species	Hordeum vulgare