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GrainGenes Marker Report: scssr03906

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Locus	scssr03906
Type	Microsatellite SNP
Synonym	Other name Ctig7260t Synonym ABC03906_L01R01
Chromosome	5H
Map	Barley, B73xCPI-5H 175.1 [ Show all 8 ]
	[ Show Nearby Loci ]
Map Data	[ Hide all but 1 of 8 ] Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, B73xCPI Barley, Consensus 2005, SNP Barley, Integrated, Marcel 2009 Barley, OWB, 2005 Barley, OWB, OPA2008 Barley, OWB, SNP
Species	Hordeum vulgare
Probe	ABC03906_L01R01 scssr03906
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Russell, Joanne
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Probe for Locus	ABC03906_L01R01
Locus	scssr03906
Data at Germinate	ABC03906
Data at PLEXdb	Barley1_03906
General Remarks	Estimated product size = 111 BarleySNP type = Contig Indel Technology platform used = Radioisotope Labelled PCR Separation Affymetrix contig name = abc03906
PCR primers	5' ACCATGTCTTCCCCAAGC 5' GGAAGTGGACGAAGAACTCC
Sequence	Barley1_03906
Source Species	Hordeum vulgare