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GrainGenes Marker Report: scssr03906

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Locus	scssr03906
Type	Microsatellite SNP
Synonym	Other name Ctig7260t Synonym ABC03906_L01R01
Chromosome	5H
Map	[ Hide all but 1 of 8 ] Barley, B73xCPI-5H 175.1 Hordeum-Consensus2005-SNP-5H 205.729 Hordeum-OWB-2005-5H 225.2 Hordeum-OWB-OPA2008-5H 240.168 Hordeum-OWB-SNP-5H 182.8 Hordeum-QTLConsensus-Abiotic-5H 205.73 Hordeum-QTLConsensus-Agronomic-5H 205.73 Hv-Integrated2009-5H 179.7
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Map Data	Barley, Abiotic QTL Consensus [ Show all 8 ]
Species	Hordeum vulgare
Probe	ABC03906_L01R01 scssr03906
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Russell, Joanne
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Probe for Locus	ABC03906_L01R01
Locus	scssr03906
Data at Germinate	ABC03906
Data at PLEXdb	Barley1_03906
General Remarks	Estimated product size = 111 BarleySNP type = Contig Indel Technology platform used = Radioisotope Labelled PCR Separation Affymetrix contig name = abc03906
PCR primers	5' ACCATGTCTTCCCCAAGC 5' GGAAGTGGACGAAGAACTCC
Sequence	Barley1_03906
Source Species	Hordeum vulgare