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GrainGenes Marker Report: scssr00334

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Locus	scssr00334
Type	Microsatellite SNP
Synonym	Other name Ctig12007 Synonym ABC00334_L01R01
Chromosome	2H
Map	[ Hide all but 1 of 9 ] Barley, B73xCPI-2H 71.7 Barley-ConsensusFHB-2H 73.03 Hordeum-Consensus2005-SNP-2H 65.889 Hordeum-Consensus2007-SSR-2H 70.98 Hordeum-OWB-OPA2008-2H 76.013 Hordeum-OWB-SNP-2H 73.31 Hordeum-QTLConsensus-Abiotic-2H 65.89 Hordeum-QTLConsensus-Agronomic-2H 65.89 Hv-Integrated2009-2H 68
	[ Show Nearby Loci ]
Map Data	Barley, Abiotic QTL Consensus [ Show all 9 ]
Species	Hordeum vulgare
Probe	ABC00334_L01R01 scssr00334
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Ramsay L et al. (2004) Variation shown by molecular markers in barley: genomic and genetic contraints Aspects of Applied Biology 72:146-154.
Data Source	Russell, Joanne
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' [ Show all 6 ]
Probe for Locus	ABC00334_L01R01
Locus	scssr00334
Data at Germinate	ABC00334
Data at PLEXdb	Barley1_00334
General Remarks	Estimated product size = 204 BarleySNP type = Contig Indel Technology platform used = Radioisotope Labelled PCR Separation Affymetrix contig name = abc00334
PCR primers	5' CAAACAGCCACTGTCCTAGC 5' AGGGCGAGGTAGATGACG
Sequence	Barley1_00334
Source Species	Hordeum vulgare