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GrainGenes Marker Report: scssr00103

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Locus	scssr00103
Type	Microsatellite SNP
Synonym	Other name Ctig4933 Synonym ABC00103_L01R01
Chromosome	6H
Map	[ Hide all but 1 of 10 ] Barley, B73xCPI-1H 51.6 Barley-ConsensusFHB-6H 100.9 Hordeum-Consensus2005-SNP-6H 121.86 Hordeum-Consensus2007-SSR-6H 105.26 Hordeum-OWB-2005-6H 135 Hordeum-OWB-SNP-6H 137.27 Hordeum-QTLConsensus-Abiotic-6H 121.86 Hordeum-QTLConsensus-Agronomic-6H 121.86 Hv-Integrated2009-6H 108 Hv-Nure/Tremois-6H 117.4
	[ Show Nearby Loci ]
Map Data	Barley, Abiotic QTL Consensus [ Show all 10 ]
Species	Hordeum vulgare
Probe	ABC00103_L01R01 scssr00103
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Ramsay L et al. (2004) Variation shown by molecular markers in barley: genomic and genetic contraints Aspects of Applied Biology 72:146-154.
Data Source	Russell, Joanne
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' [ Show all 6 ]
Probe for Locus	ABC00103_L01R01
Locus	scssr00103
Data at Germinate	ABC00103
Data at PLEXdb	Barley1_00103
General Remarks	Estimated product size = 168 BarleySNP type = Contig Indel Technology platform used = Radioisotope Labelled PCR Separation Affymetrix contig name = abc00103
PCR primers	5' GGTAAGGAGTGGGTCTCAGG 5' CAAGCAGATGCAACTACACC
Sequence	Barley1_00103
Source Species	Hordeum vulgare