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GrainGenes Marker Report: scind02622

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Locus	scind02622
Type	Indel Microsatellite
Synonym	Other name SNP3162 Synonym ABC02622_L02R02
Chromosome	2H
Map	[ Hide all but 1 of 8 ] Barley, B73xCPI-2H 7 Hordeum-Consensus2005-SNP-2H 3.031 Hordeum-OWB-2005-2H 6.9 Hordeum-OWB-OPA2008-2H 4.405 Hordeum-OWB-SNP-2H 0 Hordeum-QTLConsensus-Abiotic-2H 3.03 Hordeum-QTLConsensus-Agronomic-2H 3.03 Hv-Integrated2009-2H 9.4
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Map Data	Barley, Abiotic QTL Consensus [ Show all 8 ]
Species	Hordeum vulgare
Probe	ABC02622_L02R02 scind02622
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Russell, Joanne
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Probe for Locus	ABC02622_L02R02
Locus	scind02622
Data at Germinate	ABC02622
Data at PLEXdb	Barley1_02622
General Remarks	Estimated product size = 293 BarleySNP type = EST Indel Technology platform used = Radioisotope Labelled PCR Separation Affymetrix contig name = abc02622
Type	STS
PCR primers	5' TCATGCATGGTAGAGGTCCA 5' TTGAGAACCACTCGTCAGGA
Sequence	Barley1_02622
Source Species	Hordeum vulgare