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GrainGenes Marker Report: scind00149

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Locus	scind00149
Type	Indel Microsatellite
Synonym	Other name Best6800 Synonym ABC00149_L01R01
Chromosome	7H
Map	[ Hide all but 1 of 7 ] Barley, B73xCPI-7H 87 Hordeum-Consensus2005-SNP-7H 92.627 Hordeum-OWB-2005-7H 89.3 Hordeum-OWB-SNP-7H 77.46 Hordeum-QTLConsensus-Abiotic-7H 92.63 Hordeum-QTLConsensus-Agronomic-7H 92.63 Hv-Integrated2009-7H 78.8
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Map Data	Barley, Abiotic QTL Consensus [ Show all 7 ]
Species	Hordeum vulgare
Probe	ABC00149_L01R01 scind00149
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Russell, Joanne
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Probe for Locus	ABC00149_L01R01
Locus	scind00149
Data at Germinate	ABC00149
Data at PLEXdb	Barley1_00149
General Remarks	Estimated product size = unknown BarleySNP type = EST Indel Technology platform used = Radioisotope Labelled PCR Separation Affymetrix contig name = abc00149
Type	STS
PCR primers	5' TTGTGGGGTTTTACCTGTGA 5' ACAAACCAACCGAGCAGAAT
Sequence	Barley1_00149
Source Species	Hordeum vulgare