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GrainGenes Marker Report: k11140

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Locus	k11140
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 19.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr12H0216
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 19 ] SNP = A/G SNP structure (UNICODE) = TCCTCGGCGCRACCGCCTACA Parent 1 SNP sequence = TCCTCGGCGCAACCGCCTACA Parent 2 SNP sequence = TCCTCGGCGCGACCGCCTACA SNP = T/C SNP structure (UNICODE) = CACTTGTATGYAGTTCACCAA Parent 1 SNP sequence = CACTTGTATGTAGTTCACCAA Parent 2 SNP sequence = CACTTGTATGCAGTTCACCAA SNP = C/A SNP structure (UNICODE) = ACCAGAGCAAMTGACTCACTG Parent 1 SNP sequence = ACCAGAGCAACTGACTCACTG Parent 2 SNP sequence = ACCAGAGCAAATGACTCACTG SNP structure (UNICODE) = ACTTCACCCTYGTCCAGCACA Parent 1 SNP sequence = ACTTCACCCTTGTCCAGCACA Parent 2 SNP sequence = ACTTCACCCTCGTCCAGCACA SNP = C/T SNP structure (UNICODE) = GCGGCATCTTYCTATGGTACT Parent 1 SNP sequence = GCGGCATCTTCCTATGGTACT Parent 2 SNP sequence = GCGGCATCTTTCTATGGTACT
Probe for Locus	kr12H0216
Locus	k11140
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - ATGCTACAAACGCCAGGTTC Right 5' - GGAACATCTGTGGCTCCTTC
PCR size	255