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GrainGenes Marker Report: k11130

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Locus	k11130
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 64
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr65A0802
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/A SNP structure (UNICODE) = TGTTCTTGTAMTCGGCAATGG Parent 1 SNP sequence = TGTTCTTGTACTCGGCAATGG Parent 2 SNP sequence = TGTTCTTGTAATCGGCAATGG SNP = C/G SNP structure (UNICODE) = CGTCGTGGTCSTTCTACCGCG Parent 1 SNP sequence = CGTCGTGGTCCTTCTACCGCG Parent 2 SNP sequence = CGTCGTGGTCGTTCTACCGCG
Probe for Locus	kr65A0802
Locus	k11130
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = plasma membrane intrinsic protein 3 [Triticum aestivum]
Type	PCR
PCR primers	Left 5' - CATCTGGCACCCTTTCAGTT Right 5' - AAGCCTGCAATGCATACCTC
Sequence	BI948599
PCR size	256