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GrainGenes Marker Report: k10887

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Locus	k10887
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 171.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bastl29F0711
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 15 ] SNP = G/A SNP structure (UNICODE) = GGCCCAGAGARGAAGATTTCA Parent 1 SNP sequence = GGCCCAGAGAGGAAGATTTCA Parent 2 SNP sequence = GGCCCAGAGAAGAAGATTTCA SNP = C/G SNP structure (UNICODE) = GCTTGGCCGCSTCTCCCCTGC Parent 1 SNP sequence = GCTTGGCCGCCTCTCCCCTGC Parent 2 SNP sequence = GCTTGGCCGCGTCTCCCCTGC SNP structure (UNICODE) = CTCTTCAGCARGCTCTGCAGC Parent 1 SNP sequence = CTCTTCAGCAGGCTCTGCAGC Parent 2 SNP sequence = CTCTTCAGCAAGCTCTGCAGC SNP = C/T SNP structure (UNICODE) = CGTACAGTAGYCATACTGTGA Parent 1 SNP sequence = CGTACAGTAGCCATACTGTGA Parent 2 SNP sequence = CGTACAGTAGTCATACTGTGA
Probe for Locus	bastl29F0711
Locus	k10887
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GCATTCATCGCATGTACTGG Right 5' - CGTGAGAAAATCATCGCTCA
Sequence	BU967767
PCR size	354