Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k10568

[Submit comment/correction]

Locus	k10568
Type	CAPS
Chromosome	1H
Map	Hv-HNxH602-1H 306.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bastl26E0410
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = BanII SNP = G/C SNP structure (UNICODE) = AGAGTGCGGGSGGCTCAGTAG Parent 1 SNP sequence = AGAGTGCGGGGGGCTCAGTAG Parent 2 SNP sequence = AGAGTGCGGGCGGCTCAGTAG Recognized sequence for CAPs locus = GRGCYC
Probe for Locus	bastl26E0410
Locus	k10568
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - ACAAGAGGTTGGTGCTGCTT Right 5' - TACTCCCCTCCTGATGATCG
Sequence	CA008218
PCR size	291