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GrainGenes Marker Report: k10026

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Locus	k10026
Type	CAPS
Chromosome	1H
Map	Hv-HNxH602-1H 221.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast61E0509
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = HhaI SNP = C/T SNP structure (UNICODE) = TTTGTCTGAGYGCATGAGCTT Parent 1 SNP sequence = TTTGTCTGAGCGCATGAGCTT Parent 2 SNP sequence = TTTGTCTGAGTGCATGAGCTT Recognized sequence for CAPs locus = GCGC
Probe for Locus	bast61E0509
Locus	k10026
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TTTTTCCACGGCACAAAAGT Right 5' - TAGATTGTCAACTGTGCCGC
PCR size	352