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GrainGenes Marker Report: k09959

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Locus	k09959
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 270.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast39D0107
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 23 ] SNP = G/T SNP structure (UNICODE) = GGATGCATCAKAGGAGACTCA Parent 1 SNP sequence = GGATGCATCAGAGGAGACTCA Parent 2 SNP sequence = GGATGCATCATAGGAGACTCA SNP = A/G SNP structure (UNICODE) = TCCTACCAGARAAGGGACGAT Parent 1 SNP sequence = TCCTACCAGAAAAGGGACGAT Parent 2 SNP sequence = TCCTACCAGAGAAGGGACGAT SNP structure (UNICODE) = TCTTGGTACARGGATGCATCA Parent 1 SNP sequence = TCTTGGTACAAGGATGCATCA Parent 2 SNP sequence = TCTTGGTACAGGGATGCATCA SNP = A/C SNP structure (UNICODE) = ATGTTACTCAMGAGTTGAGAT Parent 1 SNP sequence = ATGTTACTCAAGAGTTGAGAT Parent 2 SNP sequence = ATGTTACTCACGAGTTGAGAT SNP = C/T SNP structure (UNICODE) = CCTAGGAGAAYTCTTCCTACC Parent 1 SNP sequence = CCTAGGAGAACTCTTCCTACC Parent 2 SNP sequence = CCTAGGAGAATTCTTCCTACC SNP = A/T SNP structure (UNICODE) = AGTATTAGAAWACTGAGAGCT Parent 1 SNP sequence = AGTATTAGAAAACTGAGAGCT Parent 2 SNP sequence = AGTATTAGAATACTGAGAGCT
Probe for Locus	bast39D0107
Locus	k09959
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GCAGGGTTCAGGTCTGAGAG Right 5' - ACCTATACAGCAACGCGTCC
Sequence	BU977780
PCR size	390