GrainGenes Marker Report: k09565
Locus
k09565
Type
SNP
Chromosome
3H
Map
Hv-HNxH602-3H 159
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
BaSD20B11
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ] SNP = A/G SNP structure (UNICODE) = TCCGGACGGARGGAGTACTAC Parent 1 SNP sequence = TCCGGACGGAAGGAGTACTAC Parent 2 SNP sequence = TCCGGACGGAGGGAGTACTAC SNP structure (UNICODE) = CCTAGAAATGRATGTATCTAG Parent 1 SNP sequence = CCTAGAAATGAATGTATCTAG Parent 2 SNP sequence = CCTAGAAATGGATGTATCTAG
Probe for Locus
BaSD20B11
Locus
k09565
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = putative 3-hydroxybutyryl-CoA dehydrogenase [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - AAGCGCAACGAATCAAAGTT
Right 5' - TCCGATGTTGCTGTCTGTGT
Sequence
AV928891
PCR size
364
GrainGenes Marker Report: k09565
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