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GrainGenes Marker Report: k09528

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Locus	k09528
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 103.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD14O12
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/C SNP structure (UNICODE) = TTATCTACATMCCTAGATTTG Parent 1 SNP sequence = TTATCTACATACCTAGATTTG Parent 2 SNP sequence = TTATCTACATCCCTAGATTTG SNP = T/G SNP structure (UNICODE) = CACCTTTGCAKTGGCTCACCA Parent 1 SNP sequence = CACCTTTGCATTGGCTCACCA Parent 2 SNP sequence = CACCTTTGCAGTGGCTCACCA
Probe for Locus	BaSD14O12
Locus	k09528
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBb0065J09.5 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GACTGGGGAATTGTTGGAGA Right 5' - AGTGAGCGATGCCAGAGATT
Sequence	AV836939
PCR size	432