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GrainGenes Marker Report: k09483

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Locus	k09483
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 45.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD3J13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = C/T SNP structure (UNICODE) = AGTGACGCTGYCTTCTGGGCC Parent 1 SNP sequence = AGTGACGCTGCCTTCTGGGCC Parent 2 SNP sequence = AGTGACGCTGTCTTCTGGGCC SNP = A/G SNP structure (UNICODE) = CGCCCAGACGRGGGTCCAGCA Parent 1 SNP sequence = CGCCCAGACGAGGGTCCAGCA Parent 2 SNP sequence = CGCCCAGACGGGGGTCCAGCA SNP structure (UNICODE) = CCTTGGCGTCRTGGAGCTGCT Parent 1 SNP sequence = CCTTGGCGTCATGGAGCTGCT Parent 2 SNP sequence = CCTTGGCGTCGTGGAGCTGCT
Probe for Locus	BaSD3J13
Locus	k09483
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative protein kinase [Oryza sativa]
Type	PCR
PCR primers	Left 5' - TCTGGCCTACGTTGAGAAGG Right 5' - GCAAAAGGTCCAGAGATCCA
Sequence	AV929671
PCR size	389