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GrainGenes Marker Report: k09463

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Locus	k09463
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 270.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD15J01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = TGTACAAAGTRGGGGAGATGA Parent 1 SNP sequence = TGTACAAAGTAGGGGAGATGA Parent 2 SNP sequence = TGTACAAAGTGGGGGAGATGA SNP = G/A SNP structure (UNICODE) = TGACCGCCACRATGTACTTGG Parent 1 SNP sequence = TGACCGCCACGATGTACTTGG Parent 2 SNP sequence = TGACCGCCACAATGTACTTGG
Probe for Locus	BaSD15J01
Locus	k09463
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = electron transport flavo protein -related [Arabidopsis thaliana] pir E96546 probable electron transport flavoprotein [imported] - Arabidops
Type	PCR
PCR primers	Left 5' - TCATCTTCATCTTCGCATCG Right 5' - GAGAAACTCAGCTTCCGTGG
Sequence	AV928754
PCR size	399