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GrainGenes Marker Report: k08941

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Locus	k08941
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 48
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH19L09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = C/G SNP structure (UNICODE) = CACCCGACTCSATCAGGTTCT Parent 1 SNP sequence = CACCCGACTCCATCAGGTTCT Parent 2 SNP sequence = CACCCGACTCGATCAGGTTCT SNP = A/G SNP structure (UNICODE) = ACACCGAGGCRGCGTTCTGGA Parent 1 SNP sequence = ACACCGAGGCAGCGTTCTGGA Parent 2 SNP sequence = ACACCGAGGCGGCGTTCTGGA SNP = T/C SNP structure (UNICODE) = CGCATCTCGTYACCTTGGCGG Parent 1 SNP sequence = CGCATCTCGTTACCTTGGCGG Parent 2 SNP sequence = CGCATCTCGTCACCTTGGCGG
Probe for Locus	BaH19L09
Locus	k08941
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = RuBisCO subunit binding-protein alpha subunit, chloroplast precursor (60 kDa chaperonin alpha subunit) (CPN-60
Type	PCR
PCR primers	Left 5' - CGCAAAATTGAGGAACACAA Right 5' - GGAGATTGCCAAAGCAGAAC
Sequence	AV915197
PCR size	372