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GrainGenes Marker Report: k08740

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Locus	k08740
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 176.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH32E20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/C SNP structure (UNICODE) = TCGTGCCCCAYCTCCCTCGTT Parent 1 SNP sequence = TCGTGCCCCATCTCCCTCGTT Parent 2 SNP sequence = TCGTGCCCCACCTCCCTCGTT SNP = G/A SNP structure (UNICODE) = TGTCTGGGCARGTGTGGAGCG Parent 1 SNP sequence = TGTCTGGGCAGGTGTGGAGCG Parent 2 SNP sequence = TGTCTGGGCAAGTGTGGAGCG
Probe for Locus	BaH32E20
Locus	k08740
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0018C10.44 [Oryza sativa (japonica cultivar-group)] dbj BAB90360.1 B1065E10.10 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CACATGACAACACACCCACA Right 5' - AGCTTCCAGAGCAAGAGCAG
Sequence	CA009818
PCR size	292