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GrainGenes Marker Report: k08654

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Locus	k08654
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 172.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH41P07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = TGAGAACCTCRACGATCTCGC Parent 1 SNP sequence = TGAGAACCTCGACGATCTCGC Parent 2 SNP sequence = TGAGAACCTCAACGATCTCGC SNP = T/C SNP structure (UNICODE) = CCACAGAGGCYACCTCGGTCT Parent 1 SNP sequence = CCACAGAGGCTACCTCGGTCT Parent 2 SNP sequence = CCACAGAGGCCACCTCGGTCT
Probe for Locus	BaH41P07
Locus	k08654
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = probable protein kinase [imported] - Arabidopsis thaliana gb AAC33222.1 putative protein kinase [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GAGCTCAACAGGTCATGCAA Right 5' - CAATCTTGGCCATTGGTTCT
Sequence	BJ482889
PCR size	350