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GrainGenes Marker Report: k08650

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Locus	k08650
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 114.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH15D23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/T SNP structure (UNICODE) = ACATTGCTTAWACACTATAGA Parent 1 SNP sequence = ACATTGCTTAAACACTATAGA Parent 2 SNP sequence = ACATTGCTTATACACTATAGA SNP = C/T SNP structure (UNICODE) = TTTCAGAATGYTGGAGGAATA Parent 1 SNP sequence = TTTCAGAATGCTGGAGGAATA Parent 2 SNP sequence = TTTCAGAATGTTGGAGGAATA
Probe for Locus	BaH15D23
Locus	k08650
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = metal-transporting P-type ATPase-like protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTCGTTACAGGCATCGACAG Right 5' - ATATCCAAGGACCATGAGCG
Sequence	AV943007
PCR size	353